58 lines
1.1 KiB
Nix
58 lines
1.1 KiB
Nix
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{
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lib,
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stdenv,
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fetchFromGitHub,
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fetchpatch,
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htslib,
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zlib,
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bzip2,
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xz,
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curl,
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openssl,
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}:
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stdenv.mkDerivation rec {
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pname = "angsd";
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version = "0.940";
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src = fetchFromGitHub {
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owner = "ANGSD";
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repo = "angsd";
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sha256 = "sha256-Ppxgy54pAnqJUzNX5c12NHjKTQyEEcPSpCEEVOyZ/LA=";
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tag = version;
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};
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patches = [
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# Pull pending inclusion upstream patch for parallel buil fixes:
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# https://github.com/ANGSD/angsd/pull/590
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(fetchpatch {
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name = "parallel-make.patch";
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url = "https://github.com/ANGSD/angsd/commit/89fd1d898078016df390e07e25b8a3eeadcedf43.patch";
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hash = "sha256-KQgUfr3v8xc+opAm4qcSV2eaupztv4gzJJHyzJBCxqA=";
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})
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];
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buildInputs = [
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htslib
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zlib
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bzip2
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xz
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curl
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openssl
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];
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enableParallelBuilding = true;
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makeFlags = [
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"HTSSRC=systemwide"
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"prefix=$(out)"
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];
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meta = with lib; {
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description = "Program for analysing NGS data";
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homepage = "http://www.popgen.dk/angsd";
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maintainers = [ maintainers.bzizou ];
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license = licenses.gpl2;
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};
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}
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