53 lines
1.1 KiB
Nix
53 lines
1.1 KiB
Nix
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{
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lib,
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stdenv,
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fetchFromGitHub,
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cmake,
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libcxx,
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zlib,
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nix-update-script,
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}:
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let
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version = "0.31.3";
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in
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stdenv.mkDerivation {
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pname = "splitcode";
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inherit version;
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src = fetchFromGitHub {
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owner = "pachterlab";
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repo = "splitcode";
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tag = "v${version}";
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hash = "sha256-EEYjBo52jPCSnv5WSGsXhfZEjsBCHdGerVPOZfShXBU=";
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};
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nativeBuildInputs = [ cmake ];
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buildInputs = [
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libcxx
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zlib
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];
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doCheck = true;
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checkPhase = ''
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mkdir func_tests
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cp $src/func_tests/* ./func_tests/
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bash ./func_tests/runtests.sh
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'';
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passthru.updateScript = nix-update-script { };
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meta = {
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description = "Tool for flexible, efficient parsing, interpreting, and editing of technical sequences in sequencing reads";
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homepage = "https://github.com/pachterlab/splitcode";
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license = lib.licenses.bsd2;
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platforms = lib.platforms.all;
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maintainers = with lib.maintainers; [ zimward ];
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mainProgram = "splitcode";
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badPlatforms = [
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# Test hangs indefinitely. See https://github.com/pachterlab/splitcode/issues/31
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"aarch64-linux"
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];
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};
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}
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