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This commit is contained in:
Dark Steveneq
2025-10-09 14:15:47 +02:00
commit 646b892680
49168 changed files with 5897842 additions and 0 deletions

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{
lib,
fetchFromGitHub,
buildPythonPackage,
cmake,
setuptools,
boost,
eigen,
gmp,
cgal,
mpfr,
onetbb,
numpy,
cython,
pybind11,
matplotlib,
scipy,
pytest,
enableTBB ? false,
}:
buildPythonPackage rec {
pname = "gudhi";
version = "3.11.0";
pyproject = true;
src = fetchFromGitHub {
owner = "GUDHI";
repo = "gudhi-devel";
tag = "tags/gudhi-release-${version}";
fetchSubmodules = true;
hash = "sha256-EebPvmioTYBv3VR6SNEfiqi2GC4sZn8WEj0fu42B8yM=";
};
nativeBuildInputs = [
cmake
numpy
cython
pybind11
matplotlib
setuptools
];
buildInputs = [
boost
eigen
gmp
cgal
mpfr
]
++ lib.optionals enableTBB [ onetbb ];
propagatedBuildInputs = [
numpy
scipy
];
nativeCheckInputs = [ pytest ];
cmakeFlags = [
(lib.cmakeBool "WITH_GUDHI_PYTHON" true)
(lib.cmakeFeature "Python_ADDITIONAL_VERSIONS" "3")
];
prePatch = ''
substituteInPlace src/python/CMakeLists.txt \
--replace '"''${GUDHI_PYTHON_PATH_ENV}"' ""
'';
preBuild = ''
cd src/python
'';
checkPhase = ''
runHook preCheck
rm -r gudhi
ctest --output-on-failure
runHook postCheck
'';
pythonImportsCheck = [
"gudhi"
"gudhi.hera"
"gudhi.point_cloud"
"gudhi.clustering"
];
meta = {
description = "Library for Computational Topology and Topological Data Analysis (TDA)";
homepage = "https://gudhi.inria.fr/python/latest/";
downloadPage = "https://github.com/GUDHI/gudhi-devel";
license = with lib.licenses; [
mit
gpl3
];
maintainers = with lib.maintainers; [ yl3dy ];
};
}