646b892680
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60 lines
1.3 KiB
Nix
60 lines
1.3 KiB
Nix
{
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lib,
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stdenv,
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fetchFromGitHub,
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cmake,
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autoconf,
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pkg-config,
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libz,
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bzip2,
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xz,
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}:
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stdenv.mkDerivation (finalAttrs: {
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pname = "bio-gappa";
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version = "0.9.0";
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src = fetchFromGitHub {
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owner = "lczech";
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repo = "gappa";
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tag = "v${finalAttrs.version}";
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hash = "sha256-WV8PO0v+e14tyjEm+xQGveQ0Pslgeh+osEMCqF8mue0=";
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fetchSubmodules = true;
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};
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nativeBuildInputs = [
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cmake
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pkg-config
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autoconf
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];
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buildInputs = [
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libz
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bzip2
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xz
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];
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installPhase = ''
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runHook preInstall
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mkdir -p $out/bin
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install -Dm755 ../bin/gappa $out/bin/gappa
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runHook postInstall
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'';
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meta = with lib; {
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homepage = "https://github.com/lczech/gappa";
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description = "Toolkit for analyzing and visualizing phylogenetic (placement) data";
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longDescription = ''
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gappa is a collection of commands for working with phylogenetic data. Its
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main focus are evolutionary placements of short environmental sequences
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on a reference phylogenetic tree. Such data are typically produced by
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tools such as EPA-ng, RAxML-EPA or pplacer, and usually stored in jplace
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files.
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'';
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platforms = platforms.all;
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license = licenses.gpl3Plus;
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maintainers = with maintainers; [ bzizou ];
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mainProgram = "gappa";
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};
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})
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