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46 lines
1.9 KiB
Diff
46 lines
1.9 KiB
Diff
diff --git a/src/pflotran/makefile b/src/pflotran/makefile
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index 17587c91d..7caf73e8c 100644
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--- a/src/pflotran/makefile
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+++ b/src/pflotran/makefile
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@@ -51,7 +51,7 @@ PETSC_MAKE_STOP_ON_ERROR=
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# so that PFLOTRAN will be built with the same options as
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# the petsc configured in $PETSC_DIR/$PETSC_ARCH
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-MYFLAGS = -I.
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+MYFLAGS = -I. -L@HDF5_FORTRAN_LIBS@ -I@HDF5_FORTRAN_INCLUDE@
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###############################################################################
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# Preprocessor flags for special PFLOTRAN features/hacks
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@@ -183,7 +183,7 @@ ifdef ug_mpi_scatter_ghost
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endif
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ifdef have_hdf5
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-LIBS += -L${HDF5_LIB} -lhdf5_fortran -lhdf5 -lz
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+LIBS += -L${HDF5_LIB} -lhdf5 -lhdf5_fortran -lhdf5_hl_fortran -lhdf5_f90cstub -lz
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endif
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# Set this accordingly on your platform
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@@ -273,7 +273,7 @@ pflotran_rxn_obj = ${pflotran_src}pflotran_rxn.o
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# PFLOTRAN executable
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pflotran : $(pflotran_obj)
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- ${FLINKER} -o pflotran $(pflotran_obj) ${PETSC_LIB} ${LIBS}
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+ ${FLINKER} -o pflotran $(pflotran_obj) ${PETSC_LIB} ${LIBS} -lhdf5 -lhdf5_fortran -lhdf5_hl_fortran -lhdf5_f90cstub
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# PFLOTRAN as a library
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libpflotran.a : $(pflotran_obj)
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@@ -286,11 +286,11 @@ libpflotranchem.a : $(chem_obj) $(shared_mode_aux_obj) $(util_obj)
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# object files lists below.... This is a workaround.
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pflotran_rxn : libpflotranchem.a $(pflotran_rxn_obj)
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${FLINKER} -o $@ $(pflotran_rxn_obj) $(chem_obj) $(shared_mode_aux_obj) \
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- $(util_obj) ${PETSC_LIB} ${LIBS}
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+ $(util_obj) ${PETSC_LIB} ${LIBS} -lhdf5 -lhdf5_fortran -lhdf5_hl_fortran -lhdf5_f90cstub
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# PFLOTRAN derivative test
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pflotran_derivative : $(pflotran_base_obj) pflotran_derivative.o
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- ${FLINKER} -o pflotran_derivative $(pflotran_base_obj) pflotran_derivative.o ${PETSC_LIB} ${LIBS}
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+ ${FLINKER} -o pflotran_derivative $(pflotran_base_obj) pflotran_derivative.o ${PETSC_LIB} ${LIBS} -lhdf5 -lhdf5_fortran -lhdf5_hl_fortran -lhdf5_f90cstub
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$(SRC_DIR)/pflotran_provenance.F90 : FORCE
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ifeq ($(UPDATE_PROVENANCE),1)
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