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874 lines
18 KiB
Nix
874 lines
18 KiB
Nix
{
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rPackages,
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fetchFromGitHub,
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jasp-src,
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jasp-version,
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}:
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with rPackages;
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let
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buildRPackage' = args: buildRPackage ({ name = "${args.pname}-${args.version}"; } // args);
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jaspGraphs = buildRPackage' {
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pname = "jaspGraphs";
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version = "0.19.2-unstable-2025-07-25";
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src = fetchFromGitHub {
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owner = "jasp-stats";
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repo = "jaspGraphs";
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rev = "e721a631c8357d42c1371a978db7cb5765bc7044";
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hash = "sha256-DOOKHBVTF9bVhAa/LZCH1J7A821H4mGEfy6KAEtDBNk=";
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};
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propagatedBuildInputs = [
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ggplot2
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gridExtra
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gtable
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lifecycle
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jsonlite
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R6
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RColorBrewer
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rlang
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scales
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viridisLite
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];
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};
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jaspColumnEncoder-src = fetchFromGitHub {
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owner = "jasp-stats";
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repo = "jaspColumnEncoder";
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rev = "32c53153da95087feb109c0f5f69534ffa3f32b7";
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hash = "sha256-VOMcoXpLH24auQfZCWW6hQ10u6n2GxuEQHMaXrvGTnI=";
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};
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jaspBase = buildRPackage' {
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pname = "jaspBase";
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version = jasp-version;
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src = jasp-src;
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sourceRoot = "${jasp-src.name}/Engine/jaspBase";
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env.INCLUDE_DIR = "../inst/include/jaspColumnEncoder";
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postPatch = ''
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mkdir -p inst/include
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cp -r --no-preserve=all ${jaspColumnEncoder-src} inst/include/jaspColumnEncoder
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'';
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propagatedBuildInputs = [
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cli
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codetools
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ggplot2
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gridExtra
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gridGraphics
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jaspGraphs
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jsonlite
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lifecycle
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modules
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officer
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pkgbuild
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plyr
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qgraph
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ragg
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R6
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Rcpp
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renv
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remotes
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rjson
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rvg
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svglite
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systemfonts
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withr
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];
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};
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stanova = buildRPackage' {
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pname = "stanova";
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version = "0.3-unstable-2021-06-06";
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src = fetchFromGitHub {
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owner = "bayesstuff";
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repo = "stanova";
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rev = "988ad8e07cda1674b881570a85502be7795fbd4e";
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hash = "sha256-tAeHqTHao2KVRNFBDWmuF++H31aNN6O1ss1Io500QBY=";
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};
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propagatedBuildInputs = [
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emmeans
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lme4
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coda
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rstan
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MASS
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];
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};
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bstats = buildRPackage' {
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pname = "bstats";
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version = "0.0.0.9004-unstable-2023-09-08";
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src = fetchFromGitHub {
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owner = "AlexanderLyNL";
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repo = "bstats";
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rev = "42d34c18df08d233825bae34fdc0dfa0cd70ce8c";
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hash = "sha256-N2KmbTPbyvzsZTWBRE2x7bteccnzokUWDOB4mOWUdJk=";
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};
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propagatedBuildInputs = [
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hypergeo
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purrr
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SuppDists
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];
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};
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flexplot = buildRPackage' {
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pname = "flexplot";
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version = "0.25.5";
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src = fetchFromGitHub {
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owner = "dustinfife";
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repo = "flexplot";
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rev = "9a39de871d48364dd5f096b2380a4c9907adf4c3";
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hash = "sha256-yf5wbhfffztT5iF6h/JSg4NSbuaexk+9JEOfT5Is1vE=";
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};
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propagatedBuildInputs = [
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cowplot
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MASS
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tibble
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withr
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dplyr
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magrittr
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forcats
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purrr
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plyr
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R6
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ggplot2
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patchwork
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ggsci
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lme4
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party
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mgcv
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rlang
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];
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};
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# conting has been removed from CRAN
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conting' = buildRPackage' {
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pname = "conting";
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version = "1.7.9999";
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src = fetchFromGitHub {
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owner = "vandenman";
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repo = "conting";
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rev = "03a4eb9a687e015d602022a01d4e638324c110c8";
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hash = "sha256-Sp09YZz1WGyefn31Zy1qGufoKjtuEEZHO+wJvoLArf0=";
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};
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propagatedBuildInputs = [
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mvtnorm
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gtools
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tseries
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coda
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];
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};
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buildJaspModule =
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{
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pname,
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version,
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hash,
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deps,
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}:
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buildRPackage' {
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inherit pname version;
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src = fetchFromGitHub {
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name = "${pname}-${version}-source";
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owner = "jasp-stats";
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repo = pname;
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tag = "v${version}";
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inherit hash;
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};
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propagatedBuildInputs = deps;
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# some packages have a .Rprofile that tries to activate renv
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# we disable this by removing .Rprofile
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postPatch = ''
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rm -f .Rprofile
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'';
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};
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in
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{
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inherit jaspBase;
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modules = rec {
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jaspAcceptanceSampling = buildJaspModule {
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pname = "jaspAcceptanceSampling";
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version = "0.95.0";
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hash = "sha256-MzuijLBrCd/aIACzyEWWbQoyuYl/c7iMplsIpScbqK4=";
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deps = [
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abtest
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BayesFactor
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conting'
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ggplot2
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jaspBase
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jaspGraphs
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plyr
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stringr
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vcd
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vcdExtra
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AcceptanceSampling
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];
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};
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jaspAnova = buildJaspModule {
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pname = "jaspAnova";
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version = "0.95.0";
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hash = "sha256-elunqlNy7krnoL31aeS4B7SkpKCD42S8Z8HsPeFTjEM=";
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deps = [
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afex
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BayesFactor
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boot
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car
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colorspace
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emmeans
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effectsize
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ggplot2
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jaspBase
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jaspDescriptives
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jaspGraphs
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jaspTTests
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KernSmooth
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matrixStats
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multcomp
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multcompView
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mvShapiroTest
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onewaytests
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plyr
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stringi
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stringr
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restriktor
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];
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};
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jaspAudit = buildJaspModule {
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pname = "jaspAudit";
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version = "0.95.0";
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hash = "sha256-CqrjrNm7DEyzOTg69TzksYczGBSCvhHfdfZ/HaNkhcI=";
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deps = [
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bstats
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extraDistr
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ggplot2
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ggrepel
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jaspBase
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jaspGraphs
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jfa
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];
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};
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jaspBain = buildJaspModule {
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pname = "jaspBain";
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version = "0.95.0";
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hash = "sha256-E6j7dH6jbXWhR03QVQjY30/pylrMHU6PNX13gr5KvV4=";
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deps = [
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bain
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lavaan
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ggplot2
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semPlot
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stringr
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jaspBase
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jaspGraphs
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jaspSem
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];
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};
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jaspBFF = buildJaspModule {
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pname = "jaspBFF";
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version = "0.95.0";
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hash = "sha256-fgAUdzgSNt34WL/U3/0ac1kTB5PYAvmpXeQUuNEUhuE=";
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deps = [
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BFF
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jaspBase
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jaspGraphs
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];
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};
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jaspBfpack = buildJaspModule {
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pname = "jaspBfpack";
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version = "0.95.0";
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hash = "sha256-4c7ORf0epHSdv6AB1UVMwiSEwCfVHAg0jzifBdHInoc=";
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deps = [
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BFpack
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bain
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ggplot2
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stringr
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coda
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jaspBase
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jaspGraphs
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];
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};
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jaspBsts = buildJaspModule {
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pname = "jaspBsts";
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version = "0.95.0";
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hash = "sha256-pClbOuA255mHJSy7/TpQE+oaYQbxJut9AqZRMqm8Rhg=";
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deps = [
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Boom
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bsts
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ggplot2
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jaspBase
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jaspGraphs
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matrixStats
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reshape2
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];
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};
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jaspCircular = buildJaspModule {
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pname = "jaspCircular";
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version = "0.95.0";
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hash = "sha256-Sx63VGtOZvwHF1jIjnd6aPmN1WtHHf35iQ0dzCWs1eU=";
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deps = [
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jaspBase
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jaspGraphs
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circular
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ggplot2
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];
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};
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jaspCochrane = buildJaspModule {
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pname = "jaspCochrane";
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version = "0.95.0";
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hash = "sha256-ZYMe1BJ0+HKKyHVY5riEcGE+6vZsAurWzHmPF5I7nk8=";
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deps = [
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jaspBase
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jaspGraphs
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jaspDescriptives
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jaspMetaAnalysis
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];
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};
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jaspDescriptives = buildJaspModule {
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pname = "jaspDescriptives";
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version = "0.95.0";
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hash = "sha256-gaGgSSv1D0GB8Rmzg9TYl460TjWHkK0abHDm5DHhOJg=";
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deps = [
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ggplot2
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ggrepel
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jaspBase
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jaspGraphs
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jaspTTests
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forecast
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flexplot
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ggrain
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ggpp
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ggtext
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dplyr
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tidyplots
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ggpubr
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forcats
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patchwork
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];
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};
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jaspDistributions = buildJaspModule {
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pname = "jaspDistributions";
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version = "0.95.0";
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hash = "sha256-jtPYx2wOAY7ItrkPqyMsKp7sTrL9M1TtTmR0IjxU1nw=";
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deps = [
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car
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fitdistrplus
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ggplot2
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goftest
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gnorm
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jaspBase
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jaspGraphs
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MASS
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nortest
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sgt
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sn
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];
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};
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jaspEquivalenceTTests = buildJaspModule {
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pname = "jaspEquivalenceTTests";
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version = "0.95.0";
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hash = "sha256-b/I6lb6I8rzOyyRgmsQTBMfHXfJDkrZPdwe5Kh2IVnc=";
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deps = [
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BayesFactor
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ggplot2
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jaspBase
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jaspGraphs
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metaBMA
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TOSTER
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jaspTTests
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];
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};
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jaspEsci = buildJaspModule {
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pname = "jaspEsci";
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version = "0.95.0";
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hash = "sha256-0YBC54VdVNuGdkfjWEIJnW3n/Wbch4E6tkauVm45/9c=";
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deps = [
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jaspBase
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jaspGraphs
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esci
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glue
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vdiffr
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legendry
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];
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};
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jaspFactor = buildJaspModule {
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pname = "jaspFactor";
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version = "0.95.0";
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hash = "sha256-gK4GdwADrPt2UB/UUx+2Kx5IOlFolYjNArrYpTGK9ic=";
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deps = [
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ggplot2
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jaspBase
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jaspGraphs
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jaspSem
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lavaan
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psych
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qgraph
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reshape2
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semPlot
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GPArotation
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Rcsdp
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semTools
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];
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};
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jaspFrequencies = buildJaspModule {
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pname = "jaspFrequencies";
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version = "0.95.0";
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hash = "sha256-aK4t+q6NRHGiszJa6rWx1bQddxzwynM9TOckxofdgsw";
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deps = [
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abtest
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BayesFactor
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bridgesampling
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conting'
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multibridge
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ggplot2
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interp
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jaspBase
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jaspGraphs
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plyr
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stringr
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vcd
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vcdExtra
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];
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};
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jaspJags = buildJaspModule {
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pname = "jaspJags";
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version = "0.95.0";
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hash = "sha256-DxLy3NgqvLIROBut30ne3hCUd67rCRutgM7zGvwkKNU=";
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deps = [
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coda
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ggplot2
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ggtext
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hexbin
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jaspBase
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jaspGraphs
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rjags
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runjags
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scales
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stringr
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];
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};
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jaspLearnBayes = buildJaspModule {
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pname = "jaspLearnBayes";
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version = "0.95.0";
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hash = "sha256-mka93YglICKxPXNO85Kv/gzSRAMuTkWcnAlwIExDpi0=";
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deps = [
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extraDistr
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ggplot2
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HDInterval
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jaspBase
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jaspGraphs
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MASS
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|
MCMCpack
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MGLM
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scales
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ggalluvial
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ragg
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|
rjags
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runjags
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ggdist
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png
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posterior
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];
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};
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jaspLearnStats = buildJaspModule {
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pname = "jaspLearnStats";
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version = "0.95.0";
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hash = "sha256-AcdSmAGr1ITZV/OXNpyOz0wwBlho76lvEGgt5FUHnsg=";
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deps = [
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extraDistr
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ggplot2
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jaspBase
|
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jaspGraphs
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jaspDistributions
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jaspDescriptives
|
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jaspTTests
|
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ggforce
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|
tidyr
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|
igraph
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HDInterval
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|
metafor
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];
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};
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jaspMachineLearning = buildJaspModule {
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pname = "jaspMachineLearning";
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version = "0.95.0";
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hash = "sha256-oCsXrcEAteFGfFHU65FV3jm1majA1q1w+TYCwAsvf70=";
|
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deps = [
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kknn
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|
AUC
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|
cluster
|
|
colorspace
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|
DALEX
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dbscan
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e1071
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|
fpc
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|
gbm
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|
Gmedian
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|
ggparty
|
|
ggdendro
|
|
ggnetwork
|
|
ggplot2
|
|
ggrepel
|
|
ggridges
|
|
glmnet
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|
jaspBase
|
|
jaspGraphs
|
|
MASS
|
|
mclust
|
|
mvnormalTest
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|
neuralnet
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|
network
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|
partykit
|
|
plyr
|
|
randomForest
|
|
rpart
|
|
ROCR
|
|
Rtsne
|
|
signal
|
|
VGAM
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|
];
|
|
};
|
|
jaspMetaAnalysis = buildJaspModule {
|
|
pname = "jaspMetaAnalysis";
|
|
version = "0.95.0";
|
|
hash = "sha256-5zmLCx6HuM/oBxfaAgo4y7/CYJJkiJEP9RvAsc1h/5w=";
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deps = [
|
|
dplyr
|
|
ggplot2
|
|
jaspBase
|
|
jaspGraphs
|
|
jaspSem
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|
MASS
|
|
metaBMA
|
|
metafor
|
|
metaSEM
|
|
psych
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|
purrr
|
|
rstan
|
|
stringr
|
|
tibble
|
|
tidyr
|
|
weightr
|
|
BayesTools
|
|
RoBMA
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metamisc
|
|
ggmcmc
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pema
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|
clubSandwich
|
|
CompQuadForm
|
|
sp
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|
dfoptim
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|
nleqslv
|
|
patchwork
|
|
];
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};
|
|
jaspMixedModels = buildJaspModule {
|
|
pname = "jaspMixedModels";
|
|
version = "0.95.0";
|
|
hash = "sha256-EbB7rwlfRiGPI+QIi8/SygxJgsU5nOpZ2ZEg+mETX5Y=";
|
|
deps = [
|
|
afex
|
|
emmeans
|
|
ggplot2
|
|
ggpol
|
|
jaspBase
|
|
jaspGraphs
|
|
lme4
|
|
loo
|
|
mgcv
|
|
rstan
|
|
rstanarm
|
|
stanova
|
|
withr
|
|
];
|
|
};
|
|
jaspNetwork = buildJaspModule {
|
|
pname = "jaspNetwork";
|
|
version = "0.95.0";
|
|
hash = "sha256-1RDkKRgNV6cToM2pVdHwIDE41UpFV0snIU54BEesVJw=";
|
|
deps = [
|
|
bootnet
|
|
easybgm
|
|
corpcor
|
|
dplyr
|
|
foreach
|
|
ggplot2
|
|
gtools
|
|
HDInterval
|
|
huge
|
|
IsingSampler
|
|
jaspBase
|
|
jaspGraphs
|
|
mvtnorm
|
|
qgraph
|
|
reshape2
|
|
snow
|
|
stringr
|
|
];
|
|
};
|
|
jaspPower = buildJaspModule {
|
|
pname = "jaspPower";
|
|
version = "0.95.0";
|
|
hash = "sha256-sLLJ6yqKbFlXrHPlm2G7NuHp+/kBl+kPRvi6vAy32Ds=";
|
|
deps = [
|
|
pwr
|
|
jaspBase
|
|
jaspGraphs
|
|
];
|
|
};
|
|
jaspPredictiveAnalytics = buildJaspModule {
|
|
pname = "jaspPredictiveAnalytics";
|
|
version = "0.95.0";
|
|
hash = "sha256-850PruQnCGab0g3Vdlh1LSqWYLFJUCbGNt3gWjEWP34=";
|
|
deps = [
|
|
jaspBase
|
|
jaspGraphs
|
|
bsts
|
|
bssm
|
|
precrec
|
|
reshape2
|
|
Boom
|
|
lubridate
|
|
prophet
|
|
BART
|
|
EBMAforecast
|
|
imputeTS
|
|
scoringRules
|
|
scoringutils
|
|
];
|
|
};
|
|
jaspProcess = buildJaspModule {
|
|
pname = "jaspProcess";
|
|
version = "0.95.0";
|
|
hash = "sha256-LUlk9Iy538Zenzy+W1oJiCr7dcrBQVrl4gzflwnJVyc=";
|
|
deps = [
|
|
blavaan
|
|
dagitty
|
|
ggplot2
|
|
ggraph
|
|
jaspBase
|
|
jaspGraphs
|
|
jaspJags
|
|
runjags
|
|
];
|
|
};
|
|
jaspProphet = buildJaspModule {
|
|
pname = "jaspProphet";
|
|
version = "0.95.0";
|
|
hash = "sha256-lCgqH3CfZxRImq5VndZepiy/JaXJHHh1Haj+7XhZUSE=";
|
|
deps = [
|
|
rstan
|
|
ggplot2
|
|
jaspBase
|
|
jaspGraphs
|
|
prophet
|
|
scales
|
|
];
|
|
};
|
|
jaspQualityControl = buildJaspModule {
|
|
pname = "jaspQualityControl";
|
|
version = "0.95.0";
|
|
hash = "sha256-6SvLe++9ipvHfX0Hi1xeBeoQeq+PdG9YTE5sewhqUHA=";
|
|
deps = [
|
|
car
|
|
cowplot
|
|
daewr
|
|
desirability
|
|
DoE_base
|
|
EnvStats
|
|
FAdist
|
|
fitdistrplus
|
|
FrF2
|
|
ggplot2
|
|
ggrepel
|
|
goftest
|
|
ggpp
|
|
irr
|
|
jaspBase
|
|
jaspDescriptives
|
|
jaspGraphs
|
|
mle_tools
|
|
psych
|
|
qcc
|
|
rsm
|
|
Rspc
|
|
tidyr
|
|
tibble
|
|
vipor
|
|
weibullness
|
|
];
|
|
};
|
|
jaspRegression = buildJaspModule {
|
|
pname = "jaspRegression";
|
|
version = "0.95.0";
|
|
hash = "sha256-9Q5Ei9vjFaDte//1seCj9++ftbDctkHzP8ZpGVETXH0=";
|
|
deps = [
|
|
BAS
|
|
boot
|
|
bstats
|
|
combinat
|
|
emmeans
|
|
ggplot2
|
|
ggrepel
|
|
hmeasure
|
|
jaspAnova
|
|
jaspBase
|
|
jaspDescriptives
|
|
jaspGraphs
|
|
jaspTTests
|
|
lmtest
|
|
logistf
|
|
MASS
|
|
matrixStats
|
|
mdscore
|
|
ppcor
|
|
purrr
|
|
Rcpp
|
|
statmod
|
|
VGAM
|
|
];
|
|
};
|
|
jaspReliability = buildJaspModule {
|
|
pname = "jaspReliability";
|
|
version = "0.95.0";
|
|
hash = "sha256-wxx1ECm7QKDvLLKQZbEVYTHfyn3ieks69HSP/cg5dDQ=";
|
|
deps = [
|
|
Bayesrel
|
|
coda
|
|
ggplot2
|
|
ggridges
|
|
irr
|
|
jaspBase
|
|
jaspGraphs
|
|
LaplacesDemon
|
|
lme4
|
|
MASS
|
|
psych
|
|
mirt
|
|
];
|
|
};
|
|
jaspRobustTTests = buildJaspModule {
|
|
pname = "jaspRobustTTests";
|
|
version = "0.95.0";
|
|
hash = "sha256-nw+7eZycdJ+DHlLaTSBWdHocnaZk95PBqYj8sVFlPSg=";
|
|
deps = [
|
|
RoBTT
|
|
ggplot2
|
|
jaspBase
|
|
jaspGraphs
|
|
];
|
|
};
|
|
jaspSem = buildJaspModule {
|
|
pname = "jaspSem";
|
|
version = "0.95.0";
|
|
hash = "sha256-+cgP6KqSK4tXQ+Dg6OTEoXfzEJFNdnwAat6tyWyzSkU=";
|
|
deps = [
|
|
forcats
|
|
ggplot2
|
|
lavaan
|
|
cSEM
|
|
reshape2
|
|
jaspBase
|
|
jaspGraphs
|
|
semPlot
|
|
semTools
|
|
stringr
|
|
tibble
|
|
tidyr
|
|
SEMsens
|
|
];
|
|
};
|
|
jaspSummaryStatistics = buildJaspModule {
|
|
pname = "jaspSummaryStatistics";
|
|
version = "0.95.0";
|
|
hash = "sha256-VuBDJtkDifDeatY3eX5RBd5ix6fB0QnJ1ZoM7am9SOA=";
|
|
deps = [
|
|
BayesFactor
|
|
bstats
|
|
jaspBase
|
|
jaspFrequencies
|
|
jaspGraphs
|
|
jaspRegression
|
|
jaspTTests
|
|
jaspAnova
|
|
jaspDescriptives
|
|
SuppDists
|
|
bayesplay
|
|
];
|
|
};
|
|
jaspSurvival = buildJaspModule {
|
|
pname = "jaspSurvival";
|
|
version = "0.95.0";
|
|
hash = "sha256-IVN3Tcd+OgD4pancwyNomQMOfOvUnKIWG/nxKdjNxcw=";
|
|
deps = [
|
|
survival
|
|
ggsurvfit
|
|
flexsurv
|
|
jaspBase
|
|
jaspGraphs
|
|
];
|
|
};
|
|
jaspTTests = buildJaspModule {
|
|
pname = "jaspTTests";
|
|
version = "0.95.0";
|
|
hash = "sha256-CLrfa5X/q2Ruc+y3ruHnT/NhYQ4ESvxtJCH2JM/hf4o=";
|
|
deps = [
|
|
BayesFactor
|
|
car
|
|
ggplot2
|
|
jaspBase
|
|
jaspGraphs
|
|
logspline
|
|
plotrix
|
|
plyr
|
|
];
|
|
};
|
|
jaspTestModule = buildJaspModule {
|
|
pname = "jaspTestModule";
|
|
version = "0.95.0";
|
|
hash = "sha256-r+VzUxfvWYl/Fppq/TxCw1jI8F3dohsvb6qwlQHlFDA=";
|
|
deps = [
|
|
jaspBase
|
|
jaspGraphs
|
|
svglite
|
|
stringi
|
|
];
|
|
};
|
|
jaspTimeSeries = buildJaspModule {
|
|
pname = "jaspTimeSeries";
|
|
version = "0.95.0";
|
|
hash = "sha256-hQh9p6mX3NlkToh4uQRbPtwpNLlVwsILxH+9D2caZXk=";
|
|
deps = [
|
|
jaspBase
|
|
jaspGraphs
|
|
jaspDescriptives
|
|
forecast
|
|
];
|
|
};
|
|
jaspVisualModeling = buildJaspModule {
|
|
pname = "jaspVisualModeling";
|
|
version = "0.95.0";
|
|
hash = "sha256-MX3NvfVoFPp2NLWYIYIoCdWKHxpcRhfyMCWj3VdIBC0=";
|
|
deps = [
|
|
flexplot
|
|
jaspBase
|
|
jaspGraphs
|
|
jaspDescriptives
|
|
];
|
|
};
|
|
};
|
|
}
|